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Biomolecules

Biomolecules is an international, peer-reviewed, open access journal on structures and functions of bioactive and biogenic substances, molecular mechanisms with biological and medical implications as well as biomaterials and their applications, published monthly online by MDPI.

Indexed in PubMed | Quartile Ranking JCR - Q1 (Biochemistry and Molecular Biology)

All Articles (12,317)

Zinc (Zn) is a mineral micronutrient that is essential for plant growth and development. Soil Zn deficiency or excess severely impacts plant health and crop yields. MicroRNAs (miRNAs) play crucial roles in plant responses to abiotic stress, but their roles in Zn homeostasis in important crop bread wheat (Triticum aestivum L.) remain unknown. This study investigated miRNA expression profiles in wheat roots under different Zn supply conditions using high-throughput sequencing. Phenotypic and physiological analyses revealed that high Zn promoted wheat plant growth, while low and excess Zn resulted in wheat plant growth inhibition and oxidative stress. A total of 798 miRNAs (including 70 known and 728 novel miRNAs) were identified; among them, 10 known and 122 novel miRNAs were differentially expressed. Many key miRNAs, such as miR397-5p, miR398, 4D_25791, and 5A_27668, are up-regulated under low Zn but down-regulated under high Zn and excess Zn. Target gene prediction and enrichment analysis revealed that the regulated genes of these miRNAs focused on “zinc ion transmembrane transporter activity”, “divalent inorganic cation transmembrane transporter activity”, and “cellular detoxification” processes in the low Zn vs. CK group. However, “glutathione metabolism” and “ABC transporter” pathways were obviously enriched in high Zn vs. excess Zn conditions, implying their potential functions in alleviating the oxidative damage and Zn efflux caused by Zn toxicity. Together, this study identified key miRNAs that respond to both Zn deficiency and excess Zn in bread wheat, revealing distinct regulatory patterns of the target genes in different Zn supply conditions. These findings provide a new field and valuable candidate miRNAs for molecular breeding aimed at improving zinc’s utilization efficiency in wheat.

2 January 2026

Morphological changes in wheat seedlings grown in a hydroponic solution with different Zn concentrations for three weeks. (a) The growth phenotype of wheat seedlings after three weeks. The red arrow indicated that the first leaf had yellowed. Scale bars = 2 cm. (b) Dry weight of each seedling after three weeks. (c) Fresh weight of each seedling after three weeks. (d) The plant height of each seedling after three weeks. Letters indicate a significant difference at the level of p < 0.05. Each treatment included at least nine seedlings. Three independent trials were performed with similar results in this figure.

Antimicrobial peptides have been increasingly recognized as potential anticancer agents, with the KLA peptide (KLAKLAK2) being one of the most well-known and successful examples. The research interest in the KLA peptide is attributed to its ability to induce apoptosis in cancer cells by disrupting the mitochondrial membrane. However, the KLA peptide exhibits poor cellular uptake and it lacks targeting specificity, limiting its clinical potential in cancer therapy. In this review, recent advances in nano-engineered delivery platforms for overcoming the limitations of KLA peptides and enhancing their anticancer efficacy are discussed. Specifically, various nanocarrier systems that enable targeted delivery, controlled release and/or improved bioavailability, including pH-responsive nanosystems, photo-chemo combination liposomes, self-assembled peptide-based nanostructures, nanogel-based delivery systems, homing domain-conjugated KLA structures, inorganic-based nanoparticles, and biomimetic nanocarriers, are highlighted. Additionally, synergistic strategies for combining KLA with chemotherapeutic agents or immunotherapeutic agents to overcome resistance mechanisms in cancer cells are examined. Finally, key challenges for the clinical application of these nanotechnologies are summarized and future directions are proposed.

2 January 2026

KLA peptide delivery with and without nano-engineered carriers. (Left) Free KLA peptide shows poor cellular uptake and limited mitochondrial targeting in cancer cells, resulting in minimal apoptotic activity. (Right) Nano-engineered carriers enhance cellular uptake of the KLA peptide in cancer cells, promote mitochondrial localization, and induce mitochondrial disruption and apoptosis. Created using Microsoft PowerPoint (Office 365).

Novel tRNA Synthetase Inhibitors Increase Healthspan, Lifespan, and Autophagic Flux in C. elegans

  • Olivia C. Heath,
  • Madison P. Otero and
  • Alexander T. Achusim
  • + 3 authors

We previously demonstrated that the tRNA synthetase inhibitors mupirocin and borrelidin extend lifespan in C. elegans and S. cerevisiae and that tRNA synthetase inhibition enhances autophagy in mammalian cells. In this study, we identify four additional tRNA synthetase inhibitors, REP8839, REP3123, LysRS-In-2, and halofuginone, that extend both healthspan and lifespan in C. elegans. These compounds also trigger a significant upregulation of autophagy, specifically at their lifespan-extending doses. These phenotypes partially depend on the conserved transcription factor ATF-4. Our findings further establish tRNA synthetase inhibition as a conserved mechanism for promoting increased lifespan and now healthspan, with potential implications for therapeutic interventions targeting age-related decline in humans.

1 January 2026

Novel tRNA synthetase inhibitors increase lifespan in wild-type C. elegans. (A) A total of 10 μM LysRS-IN-2 increases lifespan in wild-type C. elegans (blue) compared to the vehicle-treated group (black). (B) A total of 60 μM REP8839 increases lifespan in wild-type C. elegans (blue) compared to the vehicle-treated group (black). (C) A total of 1 μM halofuginone increases lifespan in wild-type C. elegans (blue) compared to the vehicle-treated group (black). (D) A total of 40 μM REP3123 increases lifespan in wild-type C. elegans (blue) compared to the vehicle-treated group (black). Vehicle = DMSO. ** p < 0.001. Values in parentheses indicate mean lifespan (days) and number of animals analyzed. p values were calculated using the log-rank (Mantel–Cox) test.
  • Feature Paper
  • Review
  • Open Access

Sjögren’s syndrome (SS) is a chronic systemic autoimmune disease characterized by the main clinical manifestation of oral and ocular dryness, predominantly affecting middle-aged and elderly women. As the most commonly affected target organs in SS, pathological changes in the salivary glands (SGs) and their underlying mechanisms are of great significance for understanding the disease progression. Recent studies have revealed that a dynamic imbalance of the extracellular matrix (ECM) in the SGs plays a crucial role in the pathogenesis of SS. Dysregulation of matrix metalloproteinases (MMPs) and the fibrotic processes they mediate constitute the core pathological changes. These alterations intertwine with local chronic inflammatory responses, cellular senescence, and hyperosmolarity, collectively leading to the destruction of the SG parenchymal structure and progressive loss of secretory function, significantly impairing the patients’ quality of life. However, research on the pathological mechanisms of the SG ECM remains insufficient, and there are currently no specific therapeutic interventions targeting ECM alterations in clinical practice. This review systematically elucidates the characteristics of pathological and physiological changes in the SG ECM in SS and thoroughly explores novel therapeutic strategies based on ECM regulation, as well as their clinical application prospects.

1 January 2026

Multi-driver crosstalk in Sjögren’s syndrome SG fibrogenesis. This schematic illustrates the synergistic mechanisms driving SG fibrosis in SS. Autoimmune activation, cellular senescence, and hyperosmolarity collectively stimulate inflammatory cytokine production. These cytokines induce MMP dysregulation, leading to excessive ECM degradation and glandular architecture disruption. Concurrently, chronic inflammation promotes EMT and initiates aberrant scar-repair processes. The cycle culminates in progressive fibrotic tissue deposition, ultimately resulting in irreversible gland dysfunction.

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Biomolecules - ISSN 2218-273X